Thursday, 12 February 2009

Happy Darwin Day!

Happy 200th birthday, Charles Darwin, and happy Darwin Day to all my readers!





Darwin's zorro
Lycalopex fulvipes Martin, 1837
Canidae; Carnivora; Mammalia; Chordata

The illustrations were created in MS Paint in 2004 by "painting" over the original photograph (from the Web) with a simplified range of colours, for a pop-art style. The second one (black background) was a fortuitous mistake, so I saved it!

Darwin's zorro is a South American canid (member of the dog family) often called "Darwin's fox", although it is more closely related, and shares more of a resemblance, to wolves. It bears the birthday boy's name due to him describing the animal's remarkable tameness on his visit to Chile on the Voyage of the Beagle; he was able to strike it dead with a geological hammer as it approached him. For most of the last two centuries, the species was treated as a subspecies of the more widespread grey zorro, or South American grey fox (L. griseus), but in the light of its clear morphological and molecular differences, the Darwin's zorro was named as a species in its own right. Incidentally, the genus name Lycalopex is often referred to as Pseudalopex (although the former is the more senior name, thus it gets priority), and even Dusicyon, which is usually reserved for the now extinct Falkland zorro (D. australis), also known as the warrah or Falkland Island wolf. Darwin's zorro is critically endangered, and threatened by habitat loss and competition from dogs. Little more than 300 of this beautiful animal remain, and none are held in captivity (as far as I know).


Darwin's rhea (or lesser rhea) skull
Pterocnemia pennata (or Rhea pennata) d'Orbigny, 1834
Rheidae; Rheiformes; Aves; Chordata
Cambridge Zoology Museum
June 2008

Another of Darwin's namesakes, the lesser rhea is, obviously, smaller than the more common greater rhea (Rhea americana). The two can be seen side-by-side at the Darwin: Big Idea exhibition now open at the Natural History Museum, London. It was Chuckie D. who first noticed that two similar, yet clearly different, rhea species both inhabit the pampas and plains of southern South America. A junior synonym of Rhea pennata, R. darwinii Gould, 1837, seems more fitting to this bird, but R. pennata (meaning 'feathered' - all birds are feathered) takes precedence.

Wednesday, 11 February 2009

Photo of the Day #26: Giant Anteater



Giant anteater
Myrmecophaga tridactyla Linnaeus, 1758
Myrmecophagidae; Xenarthra; Mammalia; Chordata
London Zoo
November 2008

One of the most peculiar mammals, a relict from the times when South America was an island, the giant anteater is amongst my favourite of all animals. For an animal that pretty much eats only termites (not ants!), it reaches a huge size and can defend itself pretty well.

I’ve been coming to London Zoo for years, and since the giant anteaters moved in a few years ago, I’ve tried my hardest to see them. They have a fairly large outdoor pen (where the grey wolves used to be in the 90s), as well as an indoor enclosure with a low-level window for us to peer into. The first few times I visited the anteaters, I couldn’t see them outside or indoors. In 2005, I bent down to find them in the indoor enclosure. I saw a striped lump, took a bad picture, and dissatisfied, withdrew from the niche, but in an undignified manner. I banged my head hard on the roof of the nook, and felt concussed as I walked through the squirrel monkey enclosure. That was a painful and embarrassing experience with anteaters; I felt I deserved it though, as I was taking flash photographs in the Moonlight World exhibit not long before, despite the fact that the lorises and bushbabies were getting a bit freaked out.

The last time I visited the zoo, I saw both adult anteaters, and this one paraded about inside the indoor enclosure, this being the best photo I took. I made sure not to bang my head this time.

Tuesday, 3 February 2009

Anhinga anhinga






Male anhinga
Anhinga anhinga (Linnaeus, 1766)
Anhingidae; Pelecaniformes; Aves; Chordata

Colour pencil and pen-outlined illustration by Mo Hassan, August 2008
Photograph taken in Everglades National Park, Florida, August 2008

I had wanted to visit the Everglades in southern Florida for a very long time, and two summers ago I got the chance. I stayed in a motel in Homestead, a town very close to the entrance to the National Park for one night with my parents. After arriving from Orlando, we checked into the motel and dumped our stuff then went to the Everglades, despite the threat of a thunderstorm, as is usual in the late afternoon in August in that part of the world. I was unimpressed with the park that day, seeing only a couple of American crows (Corvus brachydactylus) and a few mourning doves (Zenaida macroura), before the rains came and we turned back to Homestead.

The next morning though, we left early and took a drive through the park, to the Eco Lake in the southernmost part of the park. There, I saw a few gorgeously-coloured roseate spoonbills (Platalea ajaja) and my first ever osprey (Pandion haliaetus). We then took a walk in the northern part of the park, and saw two huge American alligators (photo of one of them here), and the beautiful anhinga you can see above. We were not very far from it, seemingly insistent that it couldn’t be seen amongst the reeds. Rather aptly, the name of the trail we chose to walk on that morning was the Anhinga trail.

The illustration is part of a series that I tried to carry out when I got back to the UK, featuring all of the bird species I had seen in my two weeks in Florida. I drew most of the herons and the double-crested cormorant and anhinga, then gave up... I was using about 6 books to get the right pose, colour and plumage details in order to copy them. The best of them all, I have to say, is the drawing of a male anhinga you see here. I normally don’t have the patience or willpower to draw white on black with pencil (it’s impossible to draw white pencil onto black pencil, so you have to leave gaps amongst the dark areas), so naturally I was shocked that it turned out so good. I’ve been urged to put this drawing on this blog by my mum.

Blissful Snow

The snowfalls the last few years in London have been puny and weak; but all of this city and much of southeast England ground to a halt yesterday as buses stopped running, trains and underground services were severely disrupted, cars skidded all over the place, and pedestrians slipped about like Bambi on ice. I awoke yesterday morning to a scene from a Christmas card: snow atop of every surface, and still falling from the clouds and settling everywhere. Nobody had been outside, not even the cats, so the snow was as pure as could be. I wrapped up warm and went outside, regressing 15 years to my childhood. Snow is the best anti-depressant there is, all worries evaporate and fall back down as joy in hexagonal crystalline form.



The view down the path to the rear section of our garden, before being spoiled by footprints.



The holly bush, which you can see in the right of the first photo, was a nice opportunity for some macro photography.



The magical scene which awaited as we passed the "middle section" of the garden. The snow here was thicker and crunched blissfully underfoot.



I wish I knew what the tiny plant in this tiny plant pot was thinking when it was buried in several centimetres of powdery, fluffy snow.



Rain and water from the gutters crystallised into stalactite-like icicles. One such spike was gigantic in size, hanging from an ivy leaf, and tasted like ice-cold bottled water (the ice in this part wasn't from the gutters!)



The snow covered almost everything that wasn't properly sheltered: this hosepipe-winding contraption looks like Santa Claus... !



The blackbird with revolving wings was frozen in motion, although he seems to be waving at us. Yes, all that snow is on his head.



Mr. Blackbird's relative, Mr. Peacock, was similarly snowed under.



This is me on the rear lawn, about to create my first snow angel...





Alright, I went a bit heavy with the feet, but I liked the way it turned out

Here's to more snow-filled British winters, and boo to hot sticky summers!!

Sunday, 1 February 2009

Charles Darwin and the Tree of Life

I've just finished watching the BBC documentary Charles Darwin and the Tree of Life, presented by Sir David Attenborough. Overall, it was a good summary of the man's life and his (and Wallace's) theory of evolution by natural selection, with footage of Attenborough in his younger days dotted about between clips of him as he is now in places such as Down House and the Natural History Museum. There was a lot of footage of my darling Museum, which I was glad to see, and was even a bit surprised when I saw Sir Dave talking in the Earth Sciences library where I am currently employed about twenty minutes into the documentary. I noticed the Richard Owen statue was at the rear of the Central Hall at the top of the first set of stairs, where Charlie Darwin now sits, as the two were moved late last year. Towards the very end of the programme, the uprooting of Owen to the dark recesses of the first floor near the Botany department, and his rightful replacement by Darwin was shown.

I noticed one biographical flaw; Attenborough stated that Darwin had studied both botany and geology at Cambridge University before going on the Voyage of the Beagle. It is well known that he had never formally studied any of the natural sciences at university, and learned Theology in Cambridge at Christ's College, which I used to pass near enough every day when I spent my undergraduate years in that city. It is true, however, that Darwin approached professors such as Adam Sedgwick to learn about geology in his free time. It should have been made clear that Darwin had no formal grounding in geology or other branch of natural history, in my opinion.

When Attenborough was explaining the wonders of the platypus, he made the fatal error of saying the platypus is a "primitive mammal". Of course it is not, it is just one which retained the same way of life as its ancestors have done for tens of million years. There was also the fact that the mass extinction of the Cretaceous-Tertiary was mentioned as "catastrophic", but not a single mention of the earlier, much more "catastrophic" Permian-Triassic one. Other than these, the programme was well put together, and Attenborough makes a grand effort at simplifying things for the masses to understand, without oversimplifying them too much. I even learnt a new tidbit of information; I was not aware that neither Darwin nor Wallace were present during the reading of their thesis to the Linnean Society in 1858, as Wallace was still in the East Indies and Darwin was mourning the death of his son.

If you want a free "Tree of Life" poster from the Beeb, you can go to this website, where there is also more information on this programme and the others in the 200th b-day celebrations series. This is not an advertisement for the BBC, they get enough of our money through licence fees.

Answers to Cranial Challenge

First of all, well done to Neil Kelley, who got all 26 questions correct! So, here are the answers to Cranial Challenge:

A: Aardwolf (Proteles cristatus, Hyaenidae)
B: Babirusa (Babyrousa babyrussa, Suidae)
C: Cassowary, southern (Casuarius casuarius, Casuariidae)
D: Dugong (Dugong dugon, Dugongidae)
E: Echidna, short-beaked (Tachyglossus aculeatus, Tachyglossidae)
F: Fox, red (Vulpes vulpes, Canidae)
G: Gharial/gavial (Gavialis gangeticus, Gavialidae)
H: Hornbill, Malabar pied (Anthracoceros coronatus, Bucerotidae)
I: Ichthyosaurus communis, Ichthyosauridae
J: Jerboa, Mongolian five-toed (Allactaga sibirica, Dipodidae)
K: Kangaroo, eastern grey (Macropus giganteus, Macropodidae)
L: Lemur, brown (Eulemur fulvus, Lemuridae)
M: Mastodon, American (Mammut americanus, Mammutidae)
N: Narwhal (Monodon monoceros, Monodontidae)
O: Orca (Orcinus orca, Delphinidae)
P: Pangolin, long-tailed (Manis longicaudata, Manidae)
Q: Quetzalcoatlus sp., Azhdarchidae
R: Rhinoceros, Sumatran (Dicerorhinus sumatraensis, Rhinocerotidae)
S: Shoveler, northern (Anas clypeata, Anatidae)
T: Thylacine/Tasmanian wolf/Tasmanian tiger (Thylacinus cynocephalus, Thylacinidae)
U: Ursus spelaeus (cave bear), Ursidae
V: Velociraptor mongoliensis, Dromaeosauridae
W: Whale, bowhead (Balaena mysticetus, Balaenidae)
X: Xiphias gladius (swordfish), Xiphiidae
Y: Yak (Bos grunniens, Bovidae)
Z: Zebra, Burchell’s (Equus burchellii, Equidae)

I hope you all learned a little something, and had fun having a go.

Tuesday, 27 January 2009

Superb Birds



Superb starling
Lamprotornis superbus Rüppell, 1845
Sturnidae; Passeriformes; Aves; Chordata
London Zoo
November 2008

The above photo of a superb starling was taken in the “Birds of Africa” aviary at London Zoo, which contains Abdim’s storks (Ciconia abdimii), hamerkops (Scopus umbretta), Madagascar teals (Anas bernieri) and various turacos (Musophagidae) amongst other birds, in a mesh-covered walk-through area with pool and waterfall. As a result of the lack of bars or fingerprint-smeared glass, and the relative boldness of the aviary’s inhabitants, I was able to get this gorgeous picture of a superb starling, originally from East Africa, whose iridescent blue-green-purple and ginger plumage gave it its name. Incidentally, I always found it laughable that the masculine Latin for “superb” is superbus, which of course sounds like “super bus”.



Superb parrot
Polytelis swainsonii (Desmarest, 1826)
Psittacidae; Psittaciformes; Aves; Chordata
Van Hage Garden Centre
November 2008

Also known as the Barraband parakeet, the superb parrot is endemic to eastern Australia and is considered Vulnerable by the IUCN. It is mostly green, as you can see here, with a long tail, which you can’t.



Superb birds-of-paradise (stuffed)
Lophorina superba (Pennant, 1781)
Paradisaeidae; Passeriformes; Aves; Chordata
Cambridge Zoology Museum
June 2008

It is not easy to see when you look at a male bird-of-paradise that it is just a glorified crow. Females, however, look more corvine than their drag queen-like mates, and sound like ravens too. The superb bird-of-paradise is no more superb looking than any other of its more well known relatives, except for the beautiful iridescent cape that the male can lift under his throat to impress potential mates. It is one of the most widespread and abundant members of the Paradisaeidae, being found throughout most parts of the island of New Guinea, where most other birds-of-paradise are found.



Superb lyrebird (stuffed)
Menura novaehollandiae Latham, 1801
Menuridae; Passeriformes; Aves; Chordata
Natural History Museum, London
February 2008

Made semi-famous for its uncanny ability to mimic all sorts of natural and man-made sounds by its appearance in David Attenborough’s Life of Birds around a decade ago, the superb lyrebird is more well known to those who know it for the male’s beautiful tail, from whence the name comes. The resemblance to a lyre is clear; there are two long and broad feathers on the outside of the tail, and several filamentous plumes in between, like the strings of a lyre. Its ability to mimic other sounds has given its name an unintentional double meaning; should “lyre” be respelled “liar”?

Moving away from living dinosaurs and onto the extinct ones: there is a new palaeo-art themed carnival coming soon!



The theme, as you can see, is Ceratopsians, the horned dinosaurs. Check out the linked ad for more information, and stay tuned for exciting news related to palaeo-art...

I'm working on my entries... now get on with yours!

Wednesday, 14 January 2009

Poisonous Pitohuis

This is a first for me; I am blogging about a research paper I have recently read. One of the perks of working in the greatest library in the world, ever, is the freedom to access any book or journal I want or need to. I was browsing the latest Molecular Phylogenetics and Evolution, and the title of this paper leapt out at me: Phylogeny of the avian genus Pitohui and the evolution of toxicity in birds. Toxicity in birds? I had known that the pitohui and some other birds have been known to have poisonous skin, but wanted to know more.



Above illustration by Mo Hassan, January 2009

Top left:
Hooded pitohui
Pitohui dichrous Bonaparte, 1850
Pachycephalidae; Passeriformes; Aves; Chordata

Bottom left:
Variable pitohui
Pitohui kirhocephalus (Lesson & Garnot, 1827)
Pachycephalidae; Passeriformes; Aves; Chordata

Top right:
Crested pitohui
"Pitohui" cristatus (Salvadori, 1875)
Pachycephalidae; Passeriformes; Aves; Chordata

Middle right:
Rusty pitohui
"Pitohui" ferrugineus (Bonaparte, 1850)
Pachycephalidae; Passeriformes; Aves; Chordata

Bottom centre:
Blue-capped ifrita
Ifrita kowaldi (De Vis, 1890)
Pachycephalidae; Passeriformes; Aves; Chordata

Bottom right:
Little shrike-thrush
Colluricincla megarhyncha (Quoy & Gaimard, 1830)
Pachycephalidae; Passeriformes; Aves; Chordata

The paper (Dumbacher et al., 2008) begins by introducing the pitohuis and the family Pachycephalidae, jay-like birds from Indonesia and Australasia. The authors then mentions that the pitohuis were found to be poisonous, secreting batrachotoxins (the same compound that is found in the toxins of poison-dart frogs and the fugu) through their skin. The toxins affect the nervous system by disabling the pathways of nervous signals. The birds have this compound probably to protect them from both predators and external parasites.

It isn’t just the pitohuis that are toxic; the blue-capped ifrita* was also found to be poisonous, but was considered only distantly related to the pitohuis; both are members of the same group that includes such different-looking birds as crows, drongos and birds-of-paradise, the Corvoidea. The ifrita had already proved difficult to pigeonhole, as various taxonomic studies placed the bird with such disparate families as the babblers, quail-thrushes, logrunners or fairy-wrens. The question was raised whether the ifrita and the pitohuis evolved the ability to secrete batrachotoxins independently, or whether their common ancestor at the base of the Corvoidea had this ability. This hypothesis was tested in this study, as well as the idea that toxicity is coupled with bright coloration.

*See this post from Darren Naish’s Tetrapod Zoology for a bit of background on the ifrita.

The genus Pitohui has been considered monophyletic (of one origin) since at least 1881, and all but one of them have been found to possess the toxins. They were known for being the “leaders” in mixed-species flocks, choosing where to feed, whilst being followed by other birds of different types. The possibility of Batesian or Müllerian mimicry taking place in these flocks is considered; Batesian mimicry is the mimicry of a poisonous species by an innocuous one (as in the monarch and viceroy butterflies); Müllerian mimicry is the co-mimicry of two unrelated poisonous species (like Heliconius butterflies).

The authors mention previous studies on the Pachycephalidae, but they note that none of them have been thorough, sampling few species, and none of the members of monotypic genera (those with only one species), none of which were known to be toxic. The complication is exacerbated further by the fact that other related families, such as the monarch flycatchers, have been difficult to analyse using phylogenetics.

A bird called the greater melampitta (Melampitta gigantea) was also analysed in this study, to find its place in the Passeriformes. Other corvoid species that were analysed include taxa which act as an outgroup, helping the phylogenetic tree to take shape. What the taxa all have in common is that they have all been considered, at one time or another, to belong to the Pachycephalidae, or to be close to it.

The aims of the study are then mentioned: to identify the nature of the toxicity, whether it is basal or derived independently; to evaluate the evolution of bright coloration in link with toxicity; and to verify the monophyly of Pitohui to test for mimicry.

55 specimens from various museums around the world were analysed in this study. The authors used standard procedures used in molecular systematics to gather the DNA from the specimens, then sequence and align the genes. The necessary phylogenetic reconstruction was then carried out using specialised software, including such techniques as Bayesian analysis (a way of modelling the likelihood of the evolution of the genes). A single maximum-likelihood tree was produced as the output, which looks very interesting.

It is evident from this tree that the pitohuis are not monophyletic, but polyphyletic. Pitohui dichrous and P. kirhocephalus form a monophyletic clade, “P.” ferrugineus and “P.” incertus seem to belong with the shrike-thrushes (Colluricincla spp.), “P.” tenebrosus, endemic to the Pacific island of Palau, is nested very neatly within Pachycephalus, the whistlers, with “P.” nigrescens as another member of this group, and “P.” cristatus fits in at the outside of this large group. Other monotypic genera of the Pachycephalidae are outside this group, with only the expected outgroups outside this. The ifrita, by the way, pairs with the greater melampitta, close to the outgroup of the birds-of-paradise.

So, what to make of this? The discussion section of the paper starts by mentioning other generic names given to some of the members of the genus “Pitohui”. The authors then admit to the polyphyly of the genus, and that they will present the results of this elsewhere in the future. I predict that P. dichrous and P. kirhocephalus will stay as they are, but the other species will have to be placed in different genera.

It is no coincidence, then, that the two species of pitohui that do form a true clade are the most vividly coloured, and the most toxic. P. kirhocephalus, the variable pitohui, is so called because of the variety of plumage forms, some brighter than others; the analysis seemed to support the monophyly of the different subspecies of P. kirhocephalus, but the data may not have been strong enough, as some of the specimens were “ancient”.

The fact remains, however, that the other birds known as pitohuis, not to mention the ifrita, are also toxic; could any other birds in the group also be toxic? Of those birds, only one, the little shrike-thrush, Colluricincla megarhyncha, tested positive, but only slightly, and perhaps the other members of that genus. Natives of New Guinea were surveyed to further test this idea, but no additional toxic birds were identified. The authors then state that, from their studies, it is likely that toxicity evolved multiple times within the Corvoidea, and it is not a basal trait. It is also likely that the pitohuis are not affected by the toxins in their beetle prey; instead, they sequester it and modify it for their own use.

The similarity of P. dichrous and P. kirhocephalus to the monarch butterfly is noted, being an example of aposematic coloration, where colours and patterns serve as a warning to potential predators. This idea was mentioned in their introduction, but they go into some more detail in their discussion. It appears that there is no clear link between coloration and toxicity, as many of the duller birds are toxic, and many of the brightly coloured ones (male birds-of-paradise included) are not. Sexual selection is cited as another possible reason for the coloration, however, this fails for the same reasons as above.

The polyphyletic pitohuis have many common characteristics; firstly, most possess some degree of toxicity while their relatives do not; secondly, they participate in mixed-species flocks and are noisy and gregarious birds, their sister taxa notably being quite contrary in this way; thirdly, they outwardly appear to be morphologically similar, whilst apparently being unrelated. Convergence is apparent in not just toxicity then, but appearance, behaviour and ecology too!

The authors admit the speculations about Batesian or Müllerian mimicry need more testing, but that there is a definite presence of some sort of mimicry, otherwise unknown amongst birds.

They conclude by mentioning the status of the morningbird, “P.” tenebrosa from Palau, putting its remarkable external difference from the Pachycephalus genus it now belongs to down to increased rate of evolution from being on a remote island.

References:
Dumbacher, J. P., K. Deiner, L. Thompson, & R. C. Fleischer (2008). Phylogeny of the avian genus Pitohui and the evolution of toxicity in birds. Molecular Phylogenetics and Evolution 49:774-81.

Saturday, 10 January 2009

Photo of the Day #25: White-winged Wood Duck

Keep your entries coming in for Cranial Challenge, please; nobody who has entered has yet got them all right!! I will close the competition at the end of the month, until then, give us your best guess at the 26 vertebrate skulls, or those you know! You don't have to be specific; the full answers will be revealed in due course.

In the mean time, here's a photo of a White-winged Wood Duck I took at the London Wetland Centre on the penultimate day of 2008. It was bloody cold, but was otherwise a pleasant day, with teals and snipe giving me a nice show; overall a ruddy good way to end a year full of birdwatching, reptile-searching and fossil foraging!



White-winged wood duck
Cairina scutulata (Müller, 1842)
Anatidae; Anseriformes; Aves; Chordata
London Wetland Centre
December 2008

The white-winged wood duck is mostly believed to be a close relative of the ubiquitous Muscovy duck (the only commonly domesticated duck species other than the mallard), hence the placement in the genus Cairina, but this may be wrong, as molecular evidence has suggested. It looks like a Muscovy duck, so I'll leave it where it is for the time being; I distrust DNA highly. It's an endangered species from south-east Asia, held in an enclosure known as "Tropical Wetlands" in the London Wetland Centre; the only thing that looks vaguely tropical about that part is a plastic Rafflesia that pigeons seem to like sitting (and crapping) on. There were white-winged wood ducks there when I first started visiting the Centre in 2005, then they vanished, being replaced by Comb ducks Sarkidiornis melanotos (indeed found in tropical Asia, but the Centre holds the South American subspecies, S. m. sylvicola). Last month I found the white-winged wood ducks back, and in greater numbers.

Friday, 2 January 2009

Caption Contest winners & Cranial Challenge

Congratulations to Traumador the Tyrannosaur who has won the caption competition from last month, featuring Darren Naish and Dave Martill!



"The itsy bittsy spider crawled up the cliff face, down came a wave and washed the spider out"

Traumador, you have won a personalised A3-sized illustration of the tetrapod or tetrapods of your choice! I would also like to offer the same prize to the stars of the photo.

The next competition has the same prize (it's all I can offer!), but is arguably more difficult. I have named it "Cranial Challenge", as it's all about identifying vertebrate skulls! There are 26 questions in the quiz, in alphabetical order from A to Z. If you think the answer for "A" is an American alligator (it isn't, by the way), then you can either just submit "alligator", or be more specific if you want. Most of the answers are the common name of the animal, but a few are of the scientific name. Send your answers to me by e-mail (see profile for e-mail address).

A:


B:


C:


D:


E:



F:


G:


H:


I:


J:


K:


L:


M:


N:


O:


P:


Q:


R:


S:


T:


U:


V:


W:


X:


Y:


Z:


Good luck!