...and greetings to MMXI. I’m writing this post on the penultimate day of the year, whilst I take a brief hiatus from the etymological research which has eaten up a lot of my time to retrospect about the year that was (and still is, for another 26 and a bit hours here in London) 2010.
It’s been a year of ups and downs for me. It has included a trip to Paris, a symposium in Cambridge, and a crippling depression. I made some new friends, got in touch with a few old ones, and lost family members.
As it currently is, I haven’t got an awful lot to complain about, and I feel thankful for all the good that’s happened to me so far, despite 2010 being punctuated with several events that could have ended very badly. I really didn’t think I’d make it through this year, and, as those who have been affected by those events will know, is no hyperbole.
I had my first taste of a proper relationship, and although it took me several months to get over, I am feeling much better for having had the experience, despite the suffering that came with it. I came out as gay this year, which was probably the single most liberating thing I have ever done. I feared a backlash, with some people declaring they weren’t comfortable with this, but so far nobody has reacted negatively. The metaphorical closet was lonely and claustrophobic, and I had to get out of there. I don’t regret the decision one iota.
I was employed for three months at Bruce Castle Museum, a spell which was ended prematurely due to the seriousness of the depression I was going through at the time. In the months since, I have slowly been getting better to the point where I now feel able to work again, and have been putting so much effort into the research for the etymological dictionary which I’m aiming to get published in 2011. I also resolve to take better care of my health (an oft-made resolution, but one which I really have to take seriously), and to get out there and make more friends in the New Year. Oh, and I must restart on some fiction projects I had started this year when my head was in an odd place.
My deepest thanks go to my friends and family who have helped support me during this oddest of years, to my online following who have boosted this tiny, yet no less shallow, ego, and to the wonder that is antidepressant medication. Here’s to a merry 2011!
Thursday, 30 December 2010
Saturday, 25 December 2010
200th post announcement
So, it’s Christmas evening and I’m suitably overfed and groggy, but I thought I’d give all my readers the news I promised I’d deliver. For this post, my 200th on The Disillusioned Taxonomist, is the public announcement of both the official Facebook group of this blog, and also the first volume of the blog in book form!!
The first eight months of The Disillusioned Taxonomist are now available to purchase from Lulu with full colour artwork and photography for the reasonable price of £23.99. If you’ve been following my blog since the beginning or thereabouts (way back in May 2008), you will most likely have fond but distant memories of Meeting with a Spinosaurus, illustrations of all the penguins of the world, biographies of my three cats, and a bizarre Cypriot museum. Of course, you could read all of these for free by checking the archives, but there are a few additional entries that might just make it worthwhile to buy!
You may be wondering why I waited until after Christmas to make this announcement, well, I simply didn’t come up with the idea until very recently. I won’t deny I have partially been influenced to publish a blook (not sure if this is a neologism, but I want credit if it is and makes it into the OED, please) by seeing Darren Naish’s first volume of Tetrapod Zoology.
The first eight months of The Disillusioned Taxonomist are now available to purchase from Lulu with full colour artwork and photography for the reasonable price of £23.99. If you’ve been following my blog since the beginning or thereabouts (way back in May 2008), you will most likely have fond but distant memories of Meeting with a Spinosaurus, illustrations of all the penguins of the world, biographies of my three cats, and a bizarre Cypriot museum. Of course, you could read all of these for free by checking the archives, but there are a few additional entries that might just make it worthwhile to buy!
You may be wondering why I waited until after Christmas to make this announcement, well, I simply didn’t come up with the idea until very recently. I won’t deny I have partially been influenced to publish a blook (not sure if this is a neologism, but I want credit if it is and makes it into the OED, please) by seeing Darren Naish’s first volume of Tetrapod Zoology.
Wednesday, 22 December 2010
Happy Holidays!
Happy Holidays to all The Disillusioned Taxonomist readers!
Special announcement for 200th post... you'll have to wait till after Crimbo, I'm afraid!!
Thursday, 9 December 2010
Interview with Brian Switek
Here follows an interview with Brian Switek, author of Written in Stone, the blogs Laelaps and Dinosaur Tracking, and several popular and academic articles.
Can you describe your sense of pride upon having a book and several articles published? Can you compare it to anything?
That's actually a tricky one to answer. There was no single, satisfying moment when I laid down the book manuscript, heaved a sigh, and said "It is finished" with a smile on my face. Quite the opposite. When I send off the last of the edits for the book my first thought was "Shit, what am I going to do now?"
Freelancing is tough. During the work week I spend most of any given day at an office job unrelated to my interests and I squeeze in whatever writing I can when I get home. As soon as I finish one essay or story I immediately start thinking of what I am going to do next and where I am going to pitch it. I have been successful with writing and I am proud of having written a book, but, since there has not been any change to my day-to-day life, I can't say that I feel any different. I'm still in "sink or swim" mode. There are simply too many things to write!
Nevertheless, the response to Written in Stone has been wonderful. Its publication made me anxious initially - I had no idea how it would be received - but I have not seen a bad review yet. I am thrilled that so many readers, with so many different backgrounds, have enjoyed the book.
With respect to the recent debate that took place on the Dinosaur Mailing List, how much importance do you think using the correct words is in forming scientific names, for example, using correct spellings of foreign words? Are you of the opinion that ignorance of such subjects sets a poor example to future generations, despite it being negligible to the actual science involved? Is there a difference between "dead" languages such as Latin, and those which are more alien to the western ear, such as Chinese?
If you are going to name a new species, you had best do it right. Regardless of whether that name has Latin roots or is being derived from another language, I think scientists have a responsibility to check and double check that the name is spelled correctly and otherwise linguistically accurate. Does a bad or misspelled name significantly hurt paleontology? I don't think so - the bones don't change even the name used to categorize them does - but making sure that words are being used correctly is just part of good science. For my own part, though, misspelled names don't bother me at all. If the recognized name for a species is misspelled, there is nothing I can do about it.
Without wanting to create some sort of patriotic rivalry, in your opinion, which country's scientists have done more for the sake of furthering the human understanding of the prehistoric world, Britain or America?
I am not going to be happy with either choice - scientists and naturalists from both countries have contributed greatly to our understanding of the history of life - but, if I must choose, I think I have to say the United States. Specifically, your question makes me think of the rapid development of American paleontology during the late 19th century when E.D. Cope and O.C. Marsh (plus their various students, assistants, and field crews) dug into the west and found creatures unlike any seen anywhere before. The creatures they were discovering were not only unique, but were also scrutinized in regard to what they could tell us about evolution - the toothed birds (Ichthyornis, Hesperornis) and multi-toed horses Marsh found, in particular, thrilled British evolutionists like Charles Darwin and Thomas Henry Huxley. And, perhaps more importantly, the opening of the American west showed that the strata of Europe could not be taken as a near-complete proxy for the fossil record elsewhere. There was much left to discover elsewhere.
After the "Bone Wars" era, paleontology became more formally ensconced in American universities and museums. True, many expeditions were sent to find the biggest and best dinosaur skeletons, but many paleontologists (Elmer Riggs, W.B. Scott, William Diller Matthew, etc.) were very interested in what fossil mammals could tell us about evolutionary change. Granted, paleontology did go through a lull during the mid-20th century, but by the 1970's the field was reinvigorated by researchers like Tom Schopf, Stephen Jay Gould, Niles Eldredge, Steven Stanley, David Raup, Jack Sepkoski, and others who turned the science into an interdisciplinary pursuit of extreme importance to evolutionary questions. This "Paleobiological Revolution" continues today, although given the exchange of scientists and ideas between countries I don't think of things in a delineated pattern of strictly American and British paleontology traditions.
As I said, I am not very happy having to pick sides, but I think the spectacular geology of North America helped paleontology take off once it became established in the United States. It is a bit of historical contingency which allowed the science to flourish here.
We know that DNA and other molecules have become important in recent decades in revolutionising our view of true phylogenies in living taxa, but how much of a role can such data seriously play in interpreting fossil groups? In your opinion, as technology improves, will molecular data become a significant part of palaeontological practice, or will we [hopefully!] revert to a more classic, anatomically-based study? [You can tell what I think; this is why I called my blog 'The Disillusioned Taxonomist' after all!]
Obviously molecular phylogenies are extremely limited in their ability to tell us about fossil groups. If a lineage is entirely extinct - and there are many, many such lineages - they molecular phylogenies cannot take them into account. Take the now-resolved debate over the origin of whales, for example. During the 1980's and 1990's paleontologists preferred mesonychids (hoofed, predatory mammals) as whale ancestors on the basis of their teeth but geneticists and molecular biologists kept finding that whales grouped close to hippos and often within the artiodactyl family tree. Both groups were using different data sets, and molecular biologists could not include mesonychids because they became extinct long ago. What the molecular phylogenies did was - using data from modern mammals - make a prediction about what might be expected. Eventually the fossil data confirmed that whales are highly-specialized artiodactyls, but the debate over the placement of the mesonychids highlights the difficulty involved in determining evolutionary relationships when (most) extinct taxa are out of the reach of molecular biologists.
But, as the debate over whale origins showed, I think an interdisciplinary approach can be useful to paleontologists. After all, any phylogeny is a hypothesis that is bound to shift as we learn more. (I can't even count all the phylogenies of theropod dinosaurs there have been...) Phylogenies are definitively provisional, and I think that molecular phylogenies can sometimes be useful in making predictions about relationships that can then be tested with data from the fossil record. If the origin of a particular group is unknown, for example, but a molecular phylogeny shows that two lineages are close together and shared a common ancestor, then paleontologists can examine the fossil evidence to see whether or not this relationship holds up. I don't really think about this debate in terms of which method is superior or inferior. Molecular phylogenies and anatomically-based phylogenies can be used as tools that test and complement each other, so I think a combined approach may continue to be fruitful (even if it initially creates more discord than agreement).
Thanks to Brian Switek for answering my questions, now go and read his book!
Can you describe your sense of pride upon having a book and several articles published? Can you compare it to anything?
That's actually a tricky one to answer. There was no single, satisfying moment when I laid down the book manuscript, heaved a sigh, and said "It is finished" with a smile on my face. Quite the opposite. When I send off the last of the edits for the book my first thought was "Shit, what am I going to do now?"
Freelancing is tough. During the work week I spend most of any given day at an office job unrelated to my interests and I squeeze in whatever writing I can when I get home. As soon as I finish one essay or story I immediately start thinking of what I am going to do next and where I am going to pitch it. I have been successful with writing and I am proud of having written a book, but, since there has not been any change to my day-to-day life, I can't say that I feel any different. I'm still in "sink or swim" mode. There are simply too many things to write!
Nevertheless, the response to Written in Stone has been wonderful. Its publication made me anxious initially - I had no idea how it would be received - but I have not seen a bad review yet. I am thrilled that so many readers, with so many different backgrounds, have enjoyed the book.
With respect to the recent debate that took place on the Dinosaur Mailing List, how much importance do you think using the correct words is in forming scientific names, for example, using correct spellings of foreign words? Are you of the opinion that ignorance of such subjects sets a poor example to future generations, despite it being negligible to the actual science involved? Is there a difference between "dead" languages such as Latin, and those which are more alien to the western ear, such as Chinese?
If you are going to name a new species, you had best do it right. Regardless of whether that name has Latin roots or is being derived from another language, I think scientists have a responsibility to check and double check that the name is spelled correctly and otherwise linguistically accurate. Does a bad or misspelled name significantly hurt paleontology? I don't think so - the bones don't change even the name used to categorize them does - but making sure that words are being used correctly is just part of good science. For my own part, though, misspelled names don't bother me at all. If the recognized name for a species is misspelled, there is nothing I can do about it.
Without wanting to create some sort of patriotic rivalry, in your opinion, which country's scientists have done more for the sake of furthering the human understanding of the prehistoric world, Britain or America?
I am not going to be happy with either choice - scientists and naturalists from both countries have contributed greatly to our understanding of the history of life - but, if I must choose, I think I have to say the United States. Specifically, your question makes me think of the rapid development of American paleontology during the late 19th century when E.D. Cope and O.C. Marsh (plus their various students, assistants, and field crews) dug into the west and found creatures unlike any seen anywhere before. The creatures they were discovering were not only unique, but were also scrutinized in regard to what they could tell us about evolution - the toothed birds (Ichthyornis, Hesperornis) and multi-toed horses Marsh found, in particular, thrilled British evolutionists like Charles Darwin and Thomas Henry Huxley. And, perhaps more importantly, the opening of the American west showed that the strata of Europe could not be taken as a near-complete proxy for the fossil record elsewhere. There was much left to discover elsewhere.
After the "Bone Wars" era, paleontology became more formally ensconced in American universities and museums. True, many expeditions were sent to find the biggest and best dinosaur skeletons, but many paleontologists (Elmer Riggs, W.B. Scott, William Diller Matthew, etc.) were very interested in what fossil mammals could tell us about evolutionary change. Granted, paleontology did go through a lull during the mid-20th century, but by the 1970's the field was reinvigorated by researchers like Tom Schopf, Stephen Jay Gould, Niles Eldredge, Steven Stanley, David Raup, Jack Sepkoski, and others who turned the science into an interdisciplinary pursuit of extreme importance to evolutionary questions. This "Paleobiological Revolution" continues today, although given the exchange of scientists and ideas between countries I don't think of things in a delineated pattern of strictly American and British paleontology traditions.
As I said, I am not very happy having to pick sides, but I think the spectacular geology of North America helped paleontology take off once it became established in the United States. It is a bit of historical contingency which allowed the science to flourish here.
We know that DNA and other molecules have become important in recent decades in revolutionising our view of true phylogenies in living taxa, but how much of a role can such data seriously play in interpreting fossil groups? In your opinion, as technology improves, will molecular data become a significant part of palaeontological practice, or will we [hopefully!] revert to a more classic, anatomically-based study? [You can tell what I think; this is why I called my blog 'The Disillusioned Taxonomist' after all!]
Obviously molecular phylogenies are extremely limited in their ability to tell us about fossil groups. If a lineage is entirely extinct - and there are many, many such lineages - they molecular phylogenies cannot take them into account. Take the now-resolved debate over the origin of whales, for example. During the 1980's and 1990's paleontologists preferred mesonychids (hoofed, predatory mammals) as whale ancestors on the basis of their teeth but geneticists and molecular biologists kept finding that whales grouped close to hippos and often within the artiodactyl family tree. Both groups were using different data sets, and molecular biologists could not include mesonychids because they became extinct long ago. What the molecular phylogenies did was - using data from modern mammals - make a prediction about what might be expected. Eventually the fossil data confirmed that whales are highly-specialized artiodactyls, but the debate over the placement of the mesonychids highlights the difficulty involved in determining evolutionary relationships when (most) extinct taxa are out of the reach of molecular biologists.
But, as the debate over whale origins showed, I think an interdisciplinary approach can be useful to paleontologists. After all, any phylogeny is a hypothesis that is bound to shift as we learn more. (I can't even count all the phylogenies of theropod dinosaurs there have been...) Phylogenies are definitively provisional, and I think that molecular phylogenies can sometimes be useful in making predictions about relationships that can then be tested with data from the fossil record. If the origin of a particular group is unknown, for example, but a molecular phylogeny shows that two lineages are close together and shared a common ancestor, then paleontologists can examine the fossil evidence to see whether or not this relationship holds up. I don't really think about this debate in terms of which method is superior or inferior. Molecular phylogenies and anatomically-based phylogenies can be used as tools that test and complement each other, so I think a combined approach may continue to be fruitful (even if it initially creates more discord than agreement).
Thanks to Brian Switek for answering my questions, now go and read his book!
Book Review: Written in Stone
Written in Stone is the first book by the incredibly talented science blogger Brian Switek (above), most famous for his blog Laelaps formerly of Science Blogs, now of Wired Science, and the exclusively dinosaurian blog Dinosaur Tracking of the Smithsonian. It’s no surprise then, that his book is a masterpiece. I shall refrain from using any more clichés in the following review, I hope.
The book is broken up into nine main chapters, an introduction, and a conclusion, each with alliterative or otherwise memorable titles. Each also begins with a classic quote, many of which are Biblical. You might think this strange from a book about evolution, a process which is wholeheartedly denied by the Bible and its followers, but these quotes work both as a prelude to the chapter you are soon to read, and an example of the frameset of the pre-twentieth century scholar who would have taken the word of God as written in the Bible as undeniable truth (I avoided saying ‘gospel’ there, phew!)
The book’s introductory chapter, titled Missing Links, begins with the very familiar story of ‘Ida’ the famous specimen of Darwinius masillae which had a book and two television documentaries made in its honour. The story is familiar to me because I too watched the story unfold from hyped headlines into a media explosion back in May last year, and did my part for ‘Ida-fest’ by reviewing the BBC documentary about the discovery. Switek aired his views about the discovery on his blog, and was picked up by the media, even here in the UK. The story may not be so familiar to those who haven’t kept track of the media as closely, and it is these readers that will benefit most from the opening chapter.
The next chapter, The Living Rock, tracks the beginnings of palaeontology, from the comparison of living shark teeth with the glossopetrae, or petrified snake tongues, which were found centuries ago, through to the work of Baron Georges Cuvier, who pictured an antediluvian world before the Great Flood of the Bible based on archaeological and palaeontological evidence. The roles of Lyell, Buckland, and Lamarck, huge names in nineteenth century natural history, are summarised, before the primary subject of the next chapter is alluded to. Moving Mountains is the alliterative title given to the chapter about Charles Darwin and Alfred Russel Wallace. Many books have been written about Darwin, but this chapter condenses the main points pertinent to the history of geology as well as the best of them.
The next seven chapters each follow the historical and evolutionary stories of a different group of organisms. To take the first tetrapods, the subject of the chapter entitled From Fins to Fingers, as an example, the story of the first fossils to belong to such transitional organisms is told in parallel with that of the actual evolutionary chronology of the group as we currently know it. The discovery of the lungfish by both Natterer and Owen, and the consequent discovery of such early amphibians as Archegosaurus are interwoven with the relationship between Acanthostega, Ichthyostega, and Tiktaalik, amongst others.
This is taken even further in the following chapter, Footprints and Feathers on the Sands of Time, which tells the story of bird evolution from theropod dinosaur ancestors. The first fossil evidence to be found, albeit not consistently interpreted as such, was footprints, followed by the famous Archaeopteryx specimen. Because these are anachronistic with respect to the chronological order in which birds first came about, the two stories interfold beautifully so the reader can fully understand the basic facts about bird evolution.
Highlights of the subsequent chapters include the inner ear anatomy of therapsids and mammals in The Meek Inherit the Earth, the discovery of ancestral whales in As Monstrous as a Whale, the variety of extinct elephants, mastodons, mammoths, and their kin in Behemoth, and the convergent evolution of a single toe in both horses and litopterns in On a Last Leg. The chapter in which I learnt the most has to be that of the evolution of hominins – that is humans and our close extinct relatives – Through the Looking Glass, in which the well-known “ape-men” such as Lucy the Australopithecus and the Hobbit man of Flores are put in context with other members of the tribe which has culminated with Homo sapiens. I learnt, for example, that we are inseparable from apes because our chromosomes differ only in lacking a pair which has in fact become fused with another pair. The importance of the bipedal stance and unimportance of truncated faces is made clear once and for all.
Switek ends the book on a philosophical note with Time and Chance, the final chapter, which brings ideas from the previous chapters together and recapitulates them to some extent. He also contemplates what would have happened if, because evolution is entirely down to chance, the occurrences that caused therapsids to develop into mammals, and for dinosaurs to develop into birds, didn’t happen. Using the example of bacterial cultures to put evolutionary theory into practice, the reader is left in awe of the mechanics of evolution, and is dumbstruck by how on Earth we managed to not yet become victims of time and chance.
The book is illustrated throughout with portraits of the scientists who feature in it, engravings and illustrations of specimens old and new, and simplified cladograms which demonstrate evolutionary relationships in many groups.
Verdict: 10/10
Available to buy on Amazon.com in U.S.A. only, but is due to be released in the UK next summer.
Stay tuned for an exclusive interview with the author, coming soon.
Tuesday, 23 November 2010
The answer is...
Fin whale skull (and rest of skeleton)
Balaenoptera physalus (Linnaeus, 1758)
Balaenopteridae; Cetartiodactyla; Mammalia; Chordata
Cambridge Zoology Museum
photograph taken June 2008
The answer to the question I posed a month ago now, that is. That 'fossilised leather belt' is actually a preserved part of the aorta of the very same fin whale whose more anterior bones you can see above. The whale washed up in Sussex on the south coast of England in 1865 (see the University of Cambridge's page about the specimen here, with a photo of the whale as it was found).
The aorta is the major artery in all mammals, starting at the heart and eventually splitting into all of the other arteries, with the exception of the pulmonary artery. It is at its widest just as it leaves the heart, so that gives you an idea of the size of the whale's cardiac pump.
That's all for now; I have been working hard on my etymological dictionary for the past month and seem to have neglected this blog! Although I rarely post here (and hardly have time for any of my favourite blogs), I can be found on Twitter most days, which takes up much less of my time (I could be wrong there!). I will be back with some interesting etymological titbits at some point!
Friday, 22 October 2010
What the hell is it?
Thursday, 14 October 2010
When a fox dies
WARNING: This post contains some images which some may find disturbing. Having said that, they're not that bad, just thought I'd better mention it!
Red fox
Vulpes vulpes (Linnaeus, 1758)
Canidae; Carnivora; Mammalia; Chordata
in my garden in Enfield
July 2010
Around two months ago, a red fox died in my garden. I wasn't aware of this fact until a few days after a most bizarre entomological experience. I awoke on a rainy Sunday morning to find well over a million blowfly larvae scattered over the patio. Once the irrational thought of a biblical plague left my mind, I began to think there must be a dead animal somewhere which spawned this mass of maggots. The maggots died or found their way to safety by the evening, but I was still no nearer to finding the cause of this plague.
Some days later, large tufts of tawny-orange fur were discovered in the flowerbed near to where the maggots were found. Later that same day, the body was discovered. The fox had been eaten, and most of what was left behind was skin, fur, bone, and ligament. From the partial carcass, I managed to salvage parts of the forelimb, spinal column, ribcage, and pelvic and pectoral girdles. Also present were parts of the tail and a piece of plastic tubing in the region of the stomach. The hind legs were nowhere to be seen, and were most likely carried off by other foxes, crows, or magpies. I decided to leave the ulnae, radii, metacarpals, carpals, and manual phalanges (forelimbs and front paws), because there was still much flesh and ligament attached to them and it would have been too difficult to extract the bone. Also missing was the skull.
The bones, along with attached soft tissue and cartilage, were placed in a bath of domestic bleach and boiling water to sterilise and colour the bones and detach any soft tissue. They were left in the solution, topped up with bleach every two days, for a week. All of the bones salvaged from the carcass can be seen above, and most can be seen in more detail below. Six pairs of ribs were found.
The scapulae (shoulder blades) are heavily ridged for attachment of the trapezius and deltoid muscles of the upper back and shoulder region.
The humeri, or upper arm bones, came apart at the head to reveal spongy marrowbone. I have tentatively glued the heads back to the humeral bodies whilst they bleach further.
Lumbar vertebrae from the lower back of the fox, with intervertebral discs present in between.
Same vertebrae as above seen in dorsal view
Several thoracic and cervical vertebrae (from the upper back and neck). The large spines on the two bones on the upper right portion of the photo are from between the scapulae where the large muscles are attached.
Pelvic bones and sacrum (hips and lower back). The intervertebral disc between the last lumbar vertebra and the sacrum can be seen at the anterior margin of the sacrum.
It was all well and good have this selection of fox bones to study, but what I really wanted was the skull. On the last day of September, whilst searching for a wood pigeon (Columba palumbus) fledgling which had fallen from its nest, I found the skull, mandible, and 4 cervical vertebrae, hidden under a tall Lawson's cypress tree only a couple of metres from where the rest of the carcass was discovered. I stripped off the skin and remembered to take photos whilst the skull was still articulated. I was glad I did this, because after the bleaching process had finished, much of the skull was in pieces, and having a photo of the skull's original condition helped in reconstructing it.
The rather dark skull and mandible, with the skull in ventral view. Much soft tissue was still present around the tip of the snout, with the entire rhinarium (nose pad) intact.
Lateral view of skull, mandible, and C1-C4. The fur can be seen covering parts of the orbit (eye socket), and indeed, during the cleaning process, I found the remnants of the sclera of the eyeball.
Skull in lateral view and mandible in occlusal view showing the teeth which are still in situ. All twelve incisors and four canines were in place, as well as a few premolars and molars. I placed this specimen in a bleach and boiling water bath, increasing the concentration of the bleach. With daily checks, I could see the bleaching process was working better for the skull than it had for the other bones, as the colour turned from almost black to white in less than a week. The only downside is that all teeth became disarticulated, the rostrum and braincase split up, and both dentaries split at the mandibular symphysis. In other words, it was in bits.
I spent the bulk of two days rearticulating the skull. The braincase was nicely intact, but the ethmoid bone and nasal conchae (bones deep inside the nasal cavity) fell apart, leaving a shower of bony shards all over the place. The maxillae/palatines and premaxillae (see below photo for labels of some bones and teeth on ventral surface of skull), and the jugal bones of the cheek became disarticulated, as did the nasals and lacrimals. The latter bones, of the inside of the eye socket, couldn't be reconstructed, thus there is a massive hole in the eye socket where the lacrimal should be!
As well as using the photos of the specimen pre-cleaning to help reconstruct the fox skull, I used the skull of a coyote (Canis latrans) I have in my collection. It remains one of my best ever buys, a natural skull with nearly all teeth in place bought on eBay for under £10... anyway, here's a size comparison of coyote on left and fox on right.
This view of the fox skull shows the nasal bones (the two long bones in the middle) which became so disarticulated that I couldn't put them back properly. They are supposed to "slide in" between the maxillae.
This lateral view of the fox skull shows just how small it is, and it shows the carnassial teeth unique to carnivorans. More on those later.
It looks like some sort of rodent with that huge diastema, but I'm glad as many teeth were preserved as there were.
The carnassials are pair of teeth on each side of the jaw which work to cut meat for swallowing. The 4th upper premolar and 1st lower molar have specially adapted cusps which act like scissor blades. In the above photos, you can see how these two carnassials shear against each other so closely. This is the hallmark of the order Carnivora, with only a few types lacking it (such as the termite-eating aardwolf Proteles cristatus and certain pinnipeds).
The mandible in lateral and occlusal views. It took awhile to get the two halves of the lower jaw to stick together.
Finally, here we have the atlas, axis, C3, and C4 of the upper neck (I think they're in the correct order, but I could be wrong). The atlas supports the skull, while the axis articulates with the rest of the neck. I have placed the bones from the first find in a concentrated bleach solution to get as white as the skull and mandible have become.
Red fox
Vulpes vulpes (Linnaeus, 1758)
Canidae; Carnivora; Mammalia; Chordata
in my garden in Enfield
July 2010
Around two months ago, a red fox died in my garden. I wasn't aware of this fact until a few days after a most bizarre entomological experience. I awoke on a rainy Sunday morning to find well over a million blowfly larvae scattered over the patio. Once the irrational thought of a biblical plague left my mind, I began to think there must be a dead animal somewhere which spawned this mass of maggots. The maggots died or found their way to safety by the evening, but I was still no nearer to finding the cause of this plague.
Some days later, large tufts of tawny-orange fur were discovered in the flowerbed near to where the maggots were found. Later that same day, the body was discovered. The fox had been eaten, and most of what was left behind was skin, fur, bone, and ligament. From the partial carcass, I managed to salvage parts of the forelimb, spinal column, ribcage, and pelvic and pectoral girdles. Also present were parts of the tail and a piece of plastic tubing in the region of the stomach. The hind legs were nowhere to be seen, and were most likely carried off by other foxes, crows, or magpies. I decided to leave the ulnae, radii, metacarpals, carpals, and manual phalanges (forelimbs and front paws), because there was still much flesh and ligament attached to them and it would have been too difficult to extract the bone. Also missing was the skull.
The bones, along with attached soft tissue and cartilage, were placed in a bath of domestic bleach and boiling water to sterilise and colour the bones and detach any soft tissue. They were left in the solution, topped up with bleach every two days, for a week. All of the bones salvaged from the carcass can be seen above, and most can be seen in more detail below. Six pairs of ribs were found.
The scapulae (shoulder blades) are heavily ridged for attachment of the trapezius and deltoid muscles of the upper back and shoulder region.
The humeri, or upper arm bones, came apart at the head to reveal spongy marrowbone. I have tentatively glued the heads back to the humeral bodies whilst they bleach further.
Lumbar vertebrae from the lower back of the fox, with intervertebral discs present in between.
Same vertebrae as above seen in dorsal view
Several thoracic and cervical vertebrae (from the upper back and neck). The large spines on the two bones on the upper right portion of the photo are from between the scapulae where the large muscles are attached.
Pelvic bones and sacrum (hips and lower back). The intervertebral disc between the last lumbar vertebra and the sacrum can be seen at the anterior margin of the sacrum.
It was all well and good have this selection of fox bones to study, but what I really wanted was the skull. On the last day of September, whilst searching for a wood pigeon (Columba palumbus) fledgling which had fallen from its nest, I found the skull, mandible, and 4 cervical vertebrae, hidden under a tall Lawson's cypress tree only a couple of metres from where the rest of the carcass was discovered. I stripped off the skin and remembered to take photos whilst the skull was still articulated. I was glad I did this, because after the bleaching process had finished, much of the skull was in pieces, and having a photo of the skull's original condition helped in reconstructing it.
The rather dark skull and mandible, with the skull in ventral view. Much soft tissue was still present around the tip of the snout, with the entire rhinarium (nose pad) intact.
Lateral view of skull, mandible, and C1-C4. The fur can be seen covering parts of the orbit (eye socket), and indeed, during the cleaning process, I found the remnants of the sclera of the eyeball.
Skull in lateral view and mandible in occlusal view showing the teeth which are still in situ. All twelve incisors and four canines were in place, as well as a few premolars and molars. I placed this specimen in a bleach and boiling water bath, increasing the concentration of the bleach. With daily checks, I could see the bleaching process was working better for the skull than it had for the other bones, as the colour turned from almost black to white in less than a week. The only downside is that all teeth became disarticulated, the rostrum and braincase split up, and both dentaries split at the mandibular symphysis. In other words, it was in bits.
I spent the bulk of two days rearticulating the skull. The braincase was nicely intact, but the ethmoid bone and nasal conchae (bones deep inside the nasal cavity) fell apart, leaving a shower of bony shards all over the place. The maxillae/palatines and premaxillae (see below photo for labels of some bones and teeth on ventral surface of skull), and the jugal bones of the cheek became disarticulated, as did the nasals and lacrimals. The latter bones, of the inside of the eye socket, couldn't be reconstructed, thus there is a massive hole in the eye socket where the lacrimal should be!
As well as using the photos of the specimen pre-cleaning to help reconstruct the fox skull, I used the skull of a coyote (Canis latrans) I have in my collection. It remains one of my best ever buys, a natural skull with nearly all teeth in place bought on eBay for under £10... anyway, here's a size comparison of coyote on left and fox on right.
This view of the fox skull shows the nasal bones (the two long bones in the middle) which became so disarticulated that I couldn't put them back properly. They are supposed to "slide in" between the maxillae.
This lateral view of the fox skull shows just how small it is, and it shows the carnassial teeth unique to carnivorans. More on those later.
It looks like some sort of rodent with that huge diastema, but I'm glad as many teeth were preserved as there were.
The carnassials are pair of teeth on each side of the jaw which work to cut meat for swallowing. The 4th upper premolar and 1st lower molar have specially adapted cusps which act like scissor blades. In the above photos, you can see how these two carnassials shear against each other so closely. This is the hallmark of the order Carnivora, with only a few types lacking it (such as the termite-eating aardwolf Proteles cristatus and certain pinnipeds).
The mandible in lateral and occlusal views. It took awhile to get the two halves of the lower jaw to stick together.
Finally, here we have the atlas, axis, C3, and C4 of the upper neck (I think they're in the correct order, but I could be wrong). The atlas supports the skull, while the axis articulates with the rest of the neck. I have placed the bones from the first find in a concentrated bleach solution to get as white as the skull and mandible have become.
Friday, 10 September 2010
Long time, no blog...
... it may seem like I have vanished off the face off the Earth, and for that, I apologise. I am working on many ideas for blog posts: it turns out the island project I had mentioned a while back probably won't make it onto The Disillusioned Taxonomist. Although I completed it several months ago, I am less than proud of many of the drawings. There are a few outstanding illustrations, the best of which are towards the end of this post, but perhaps due to the paper quality, the scan quality, and my own substandard work, the majority of the illustrations look too poor to upload and show off. Perhaps in due course I will be able to rectify this, but for now, there are other projects in the pipeline. One of them, which I am soon to begin, is to draw every species of extant carnivoran. There are about 250 of them, so that should keep me busy for a while! For now, enjoy some oldies from my back catalogue, and some of the better island critters.
Smilodon fatalis (Leidy, 1868)
Felidae; Carnivora; Mammalia; Chordata
Graphite pencil illustration of mounted skeleton in Natural History Museum, London
December 2008
Gomphotherium angustidens Burmeister, 1837
Gomphotheriidae; Proboscidea; Mammalia; Chordata
Graphite pencil illustration
February 2009
Entelodon magnus Aymard, 1846
Entelodontidae; Cetartiodactyla; Mammalia; Chordata
Graphite pencil illustration
February 2009
'Ida'
Darwinius masillae Franzen et al., 2009
Notharctidae; Primates; Mammalia; Chordata
Graphite pencil illustration
May 2009
Basilosaurus isis (Andrews, 1904)
Basilosauridae; Cetartiodactyla; Mammalia; Chordata
Graphite pencil illustration
December 2008
Rebbachisaurus garasbae Lavocat, 1954
Rebbachisauridae; Saurischia; Sauropsida; Chordata
Ink pen illustration
October 2009
Valdosaurus canaliculatus (Galton, 1975)
Dryosauridae; Ornithischia; Sauropsida; Chordata
Colour pencil illustration
June 2009
Rhomaleosaurus cramptoni (Tate & Blake, 1863)
Rhomaleosauridae; Plesiosauria; Sauropsida; Chordata
Graphite pencil illustration of mounted cast in Natural History Museum, London
January 2010
Tapejara and Tupuxuara (or 'Two Tapejarids')
Tapejara wellnhoferi Kellner, 1989 (top) - family Tapejaridae
Tupuxuara longicristatus Kellner & Campos, 1988 (bottom) - family incertae sedis
both Pterosauria; Sauropsida; Chordata
Colour pencil illustration
September 2008
Dimetrodon and Edaphosaurus (or 'Two Pelycosaurs')
Dimetrodon angelensis Olson, 1962 (top)
Edaphosaurus pogonias Cope, 1882 (bottom)
Sphenacodontidae; Pelycosauria; Synapsida; Chordata
Colour pencil illustration
December 2008
Huayangosaurus taibaii Dong, Tang, & Zhou, 1982
Huayangosauridae; Ornithischia; Sauropsida; Chordata
Colour pencil illustration
June 2008
Centrosaurine skulls
Ceratopsidae; Ornithischia; Sauropsida; Chordata
Graphite pencil illustrations
February 2009
Argentinosaurus huinculensis Bonaparte & Coria, 1993
Family incertae sedis; Saurischia; Sauropsida; Chordata
Ink pen illustration
October 2009
Parasaurolophus, Lambeosaurus, Saurolophus, Olorotitan, and Corythosaurus (or 'Five Hadrosaurids')
Clockwise from top left:
Parasaurolophus walkeri Parks, 1922 - coloration inspired by the hoopoe (Upupa epops)
Lambeosaurus lambei Parks, 1923 - coloration inspired by the mandarin duck (Aix galericulata)
Saurolophus osborni Brown, 1912 - coloration inspired by the secretary bird (Sagittarius serpentarius)
Olorotitan arharensis Godefroit et al., 2003 - coloration inspired by the roseate spoonbill (Platalea ajaja)
Corythosaurus casuarius Brown, 1914 - coloration inspired by the southern cassowary (Casuarius casuarius)
Hadrosauridae; Ornithischia; Sauropsida; Chordata
Colour pencil illustration
July 2008
Plateosaurus, Apatosaurus, and Brachiosaurus (or 'Three Sauropodomorphs')
Plateosaurus engelhardti von Meyer, 1837 (top) - family Plateosauridae
Apatosaurus louisae Holland, 1915 (middle) - family Diplodocidae
Brachiosaurus altithorax Riggs, 1903 (bottom) - family Brachiosauridae
Saurischia; Sauropsida; Chordata
Colour pencil illustration
June 2008
Humboldt penguin
Spheniscus humboldti Meyen, 1834
Spheniscidae; Sphenisciformes; Aves; Chordata
Colour pencil illustration
late 2006
Caribbean flamingo
Phoenicopterus ruber Linnaeus, 1758
Phoenicopteridae; Phoenicopteriformes; Aves; Chordata
Colour pencil illustration
May 2010
Gastornis parisiensis Hébert, 1855
Gastornithidae; Gastornithiformes; Aves; Chordata
Colour pencil illustration
December 2008
Emperor penguin
Aptenodytes forsteri (Gray, 1844)
Spheniscidae; Sphenisciformes; Aves; Chordata
Colour pencil illustration
late 2006
Male anhinga
Anhinga anhinga (Linnaeus, 1766)
Anhingidae; Pelecaniformes; Aves; Chordata
Colour pencil illustration
August 2007
Sula Islands barn owl
Tyto nigrobrunnea Neumann, 1939
Tytonidae; Strigiformes; Aves; Chordata
Colour pencil illustration
February 2010
Tiktaalik roseae Daeschler, Shubin, & Jenkins, 2006
Family and order incertae sedis; Sarcopterygii; Chordata
Colour pencil illustration
February 2010
Cuban solenodon
Solenodon cubanus Peters, 1861
Solenodontidae; Eulipotyphla; Mammalia; Chordata
Colour pencil illustration
February 2010
Brothers Island tuatara
Sphenodon guntheri (Buller, 1877)
Sphenodontidae; Rhynchocephalia; Sauropsida; Chordata
Colour pencil illustration
February 2010
Smilodon fatalis (Leidy, 1868)
Felidae; Carnivora; Mammalia; Chordata
Graphite pencil illustration of mounted skeleton in Natural History Museum, London
December 2008
Gomphotherium angustidens Burmeister, 1837
Gomphotheriidae; Proboscidea; Mammalia; Chordata
Graphite pencil illustration
February 2009
Entelodon magnus Aymard, 1846
Entelodontidae; Cetartiodactyla; Mammalia; Chordata
Graphite pencil illustration
February 2009
'Ida'
Darwinius masillae Franzen et al., 2009
Notharctidae; Primates; Mammalia; Chordata
Graphite pencil illustration
May 2009
Basilosaurus isis (Andrews, 1904)
Basilosauridae; Cetartiodactyla; Mammalia; Chordata
Graphite pencil illustration
December 2008
Rebbachisaurus garasbae Lavocat, 1954
Rebbachisauridae; Saurischia; Sauropsida; Chordata
Ink pen illustration
October 2009
Valdosaurus canaliculatus (Galton, 1975)
Dryosauridae; Ornithischia; Sauropsida; Chordata
Colour pencil illustration
June 2009
Rhomaleosaurus cramptoni (Tate & Blake, 1863)
Rhomaleosauridae; Plesiosauria; Sauropsida; Chordata
Graphite pencil illustration of mounted cast in Natural History Museum, London
January 2010
Tapejara and Tupuxuara (or 'Two Tapejarids')
Tapejara wellnhoferi Kellner, 1989 (top) - family Tapejaridae
Tupuxuara longicristatus Kellner & Campos, 1988 (bottom) - family incertae sedis
both Pterosauria; Sauropsida; Chordata
Colour pencil illustration
September 2008
Dimetrodon and Edaphosaurus (or 'Two Pelycosaurs')
Dimetrodon angelensis Olson, 1962 (top)
Edaphosaurus pogonias Cope, 1882 (bottom)
Sphenacodontidae; Pelycosauria; Synapsida; Chordata
Colour pencil illustration
December 2008
Huayangosaurus taibaii Dong, Tang, & Zhou, 1982
Huayangosauridae; Ornithischia; Sauropsida; Chordata
Colour pencil illustration
June 2008
Centrosaurine skulls
Ceratopsidae; Ornithischia; Sauropsida; Chordata
Graphite pencil illustrations
February 2009
Argentinosaurus huinculensis Bonaparte & Coria, 1993
Family incertae sedis; Saurischia; Sauropsida; Chordata
Ink pen illustration
October 2009
Parasaurolophus, Lambeosaurus, Saurolophus, Olorotitan, and Corythosaurus (or 'Five Hadrosaurids')
Clockwise from top left:
Parasaurolophus walkeri Parks, 1922 - coloration inspired by the hoopoe (Upupa epops)
Lambeosaurus lambei Parks, 1923 - coloration inspired by the mandarin duck (Aix galericulata)
Saurolophus osborni Brown, 1912 - coloration inspired by the secretary bird (Sagittarius serpentarius)
Olorotitan arharensis Godefroit et al., 2003 - coloration inspired by the roseate spoonbill (Platalea ajaja)
Corythosaurus casuarius Brown, 1914 - coloration inspired by the southern cassowary (Casuarius casuarius)
Hadrosauridae; Ornithischia; Sauropsida; Chordata
Colour pencil illustration
July 2008
Plateosaurus, Apatosaurus, and Brachiosaurus (or 'Three Sauropodomorphs')
Plateosaurus engelhardti von Meyer, 1837 (top) - family Plateosauridae
Apatosaurus louisae Holland, 1915 (middle) - family Diplodocidae
Brachiosaurus altithorax Riggs, 1903 (bottom) - family Brachiosauridae
Saurischia; Sauropsida; Chordata
Colour pencil illustration
June 2008
Humboldt penguin
Spheniscus humboldti Meyen, 1834
Spheniscidae; Sphenisciformes; Aves; Chordata
Colour pencil illustration
late 2006
Caribbean flamingo
Phoenicopterus ruber Linnaeus, 1758
Phoenicopteridae; Phoenicopteriformes; Aves; Chordata
Colour pencil illustration
May 2010
Gastornis parisiensis Hébert, 1855
Gastornithidae; Gastornithiformes; Aves; Chordata
Colour pencil illustration
December 2008
Emperor penguin
Aptenodytes forsteri (Gray, 1844)
Spheniscidae; Sphenisciformes; Aves; Chordata
Colour pencil illustration
late 2006
Male anhinga
Anhinga anhinga (Linnaeus, 1766)
Anhingidae; Pelecaniformes; Aves; Chordata
Colour pencil illustration
August 2007
Sula Islands barn owl
Tyto nigrobrunnea Neumann, 1939
Tytonidae; Strigiformes; Aves; Chordata
Colour pencil illustration
February 2010
Tiktaalik roseae Daeschler, Shubin, & Jenkins, 2006
Family and order incertae sedis; Sarcopterygii; Chordata
Colour pencil illustration
February 2010
Cuban solenodon
Solenodon cubanus Peters, 1861
Solenodontidae; Eulipotyphla; Mammalia; Chordata
Colour pencil illustration
February 2010
Brothers Island tuatara
Sphenodon guntheri (Buller, 1877)
Sphenodontidae; Rhynchocephalia; Sauropsida; Chordata
Colour pencil illustration
February 2010
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